Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849778.1_cds_XP_016510934.1_23723
CDS Infomation

[gene=LOC107828179] [db_xref=GeneID:107828179] [protein=uncharacterized protein LOC107828179 isoform X2] [protein_id=XP_016510934.1] [location=join(119966..120481,120609..121884,122812..122895,123381..123445)] [gbkey=CDS]
Sequence

ATGGCTGAACAGGGACTTGACTCATTTCAAAGGGTACGGCAATCAAAAGGAAACCAGGAA
CTGAATGATGAGTTGAAAATCAAAGCAAATGAACTCGAGAAGCTATTCGCCGAGCATAAA
CTACGTACTCCTCCTGGAAATCAATCTAATTTTATCAGCAGAATTGGTAGGCATAGTTAC
ATGCAAAGTTGGCCATCAGCTACTTCATCCTACAGTAATCCTGTATTAGATAATGCTTTT
GTCGATCAAGTGTTTGATAATTGTTCGTTTAGGGAACCTGATAGGAACTCTTCTGATGAG
GTAAATAGTTCTACTGGCGGTTCTCCAGGGAAATTCTATGATATGTATATGCAGAAAAGG
GATGCAAAACTTAAGGAAGAATGGAATTCTAAAGGAGCAGAGAAAGAAGCCAAGTTGAAA
GCTATGGAGGATAGCCTTGAGAGGAGTAAAGCTGAAATGAAGACTATGGAGAGGCTCAGA
TCATTTAACTCCACCTCTATTTTTAGCAGAAACCAGCAACAATCAGAATTTGGGCAAAGT
GATGATAGAGAACATAAGCCTGGAGAAGAAGTTTCTAAACAAAATGCTCAGAGGAAGAAA
CAACATTTACCTATCAAAACTTCATCTACACCTCGCACCATAGTAGCATCTATTCCAAGG
TCTCCAGTGAAGGCTTCTAGTAGTCCTTCTAGTCGCCGAAAATTTCAACCTGAAAGTCCA
ATTGCACGTTCTGTTCCAAACTTGTCTTACCTGAGAAAGGAAAACTCAGAGCCTTCTTCT
CTGGCTGGTAAAATGACTACTCGTTCACAATCCAGGAACTATTCCCGTAGCAAATTACTG
CACTCACAGTCCTTGAGAAAAAGCTCTGCTTTGAATTCTGAGGGTGTTAGCTTGGCACCT
CTCAAATTTGATAAGGACAAGATGGAACATAGTCGTCCTAAGGGTGTAATTTCAGCACCT
CCAAAATCTGGCAATGAAAAGAAGGAGCAGAGTCTTACAGATAAAATTCCCAGCATTTCA
GATTCAAAGGCTTCCCCAAAGAAGGAAAAAGATGCTGACTTCAGTTTAAGAGGTGGTTTG
ATTGAGACAAGGGGTTCTAATATTGTATCTAATTTTGCGCACAATGATGATGATGAGGCT
GAGGCTGAGGCTGAGGCTGATGATGATTATATGGAATTGGATTCCGAGAACTCAGTGAAT
ATAGATGAGGACGACTTTGAGAACATGATATCTGCAGTTGAGGAAATTTTTGATAATAAG
ACACAAAGACTGAGCCATGAGACAGAGAAGCTGGTAAATTCTGTTTCAGGATTTGGTGAT
ATCCTGAGATCACCTTCTTCTGTGCCTTCTAGCTTCCTCTCCGGTAGATTTGCATACGAG
TCACCAAGAGAAAGTAGTCCTATCTCACAGACTGATCATCACCCTTTTTCTTATCCTCAT
GACATGTCTGATGTTGATGCTTCAGGCTCTCCCGTGGGAAACCCTGCATCCTATAATTCA
CATTTTATGAGTCCAACGGAGCATGACTCAGCTGCTAGAATGAGGAAGAAATGGGGAATG
GCAGCTCAGAAACCAATCCATGTTTCTTCTCAAAGTCAATTGCGCAAGGATAAGGCTAGA
GGATTTAAACGGTTATTAAAATTTGGAAAGAAAAACCATGGAGCAGATAGTTTGGTTAAA
GATTGGATTTCAGCAACTACTTATAAGGGAGATGATGGCACGAGAAATGGACTTGATCCT
CCAAATCGATCTGATGTTTGCCTATATGAGGATGAGTTTTTCAACGAACAAGTTCAAACC
TTGCACACTTCTATTCCGGCAGCTCCAGCTAACTTCAAATTGAGGGAAGATCATTTATCA
GGAAGCTCAATAAAGGCACCAAGACCGTTCTTTTCCTTGTCGTCATTCAGAAGCAAGGGA
AAGGACTCAAAGCCGAGATAA

Peptide Sequence

PEP ID

XP_016510934.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107828179 isoform X2 [Nicotiana tabacum]
Sequence

MAEQGLDSFQRVRQSKGNQELNDELKIKANELEKLFAEHKLRTPPGNQSNFISRIGRHSY
MQSWPSATSSYSNPVLDNAFVDQVFDNCSFREPDRNSSDEVNSSTGGSPGKFYDMYMQKR
DAKLKEEWNSKGAEKEAKLKAMEDSLERSKAEMKTMERLRSFNSTSIFSRNQQQSEFGQS
DDREHKPGEEVSKQNAQRKKQHLPIKTSSTPRTIVASIPRSPVKASSSPSSRRKFQPESP
IARSVPNLSYLRKENSEPSSLAGKMTTRSQSRNYSRSKLLHSQSLRKSSALNSEGVSLAP
LKFDKDKMEHSRPKGVISAPPKSGNEKKEQSLTDKIPSISDSKASPKKEKDADFSLRGGL
IETRGSNIVSNFAHNDDDEAEAEAEADDDYMELDSENSVNIDEDDFENMISAVEEIFDNK
TQRLSHETEKLVNSVSGFGDILRSPSSVPSSFLSGRFAYESPRESSPISQTDHHPFSYPH
DMSDVDASGSPVGNPASYNSHFMSPTEHDSAARMRKKWGMAAQKPIHVSSQSQLRKDKAR
GFKRLLKFGKKNHGADSLVKDWISATTYKGDDGTRNGLDPPNRSDVCLYEDEFFNEQVQT
LHTSIPAAPANFKLREDHLSGSSIKAPRPFFSLSSFRSKGKDSKPR

Transcript Sequence

Gene sequence data has not been registered.